Discovering Biomolecular Mechanisms with Computational Biology

Prediction of Post-translational modifications from amino acid sequence: Problems, pitfalls, methodological hints.- Deriving Biological Function of Genome Information with Biomolecular Sequence and Structure Analysis.- Reliable and Specific Protein Function Prediction by Combining Homology with Genomic(s) Context.- Clues from Three-Dimensional Structure Analysis and Molecular Modelling.- Prediction of Protein Function.- Complementing Biomolecular Sequence Analysis with Text Mining in Scientific Articles.- Extracting Information for Meaningful Function Inference through Text-Mining.- Literature and Genome Data Mining for Prioritizing Disease-Associated Genes.- Mechanistic Predictions from the Analysis of Biomolecular Networks.- Model-Based Inference of Transcriptional Regulatory Mechanisms from DNA Microarray Data.- The Predictive Power of Molecular Network Modelling.- Mechanistic Predictions from the Analysis of Biomolecular Sequence Populations: Considering Evolution for Function Prediction.- Theory of Early Molecular Evolution.- Hitchhiking Mapping.- Understanding the Functional Importance of Human Single Nucleotide Polymorphisms.- Correlations between Quantitative Measures of Genome Evolution, Expression and Function.